Reactome | XRN1 [cytosol]

XRN1 [cytosol]

Stable Identifier

R-SCE-429835

Type

Protein [EntityWithAccessionedSequence]

Species

Saccharomyces cerevisiae

Compartment

cytosol

Synonyms

XRN1, P22147

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:P22147 XRN1

Gene Names

XRN1, DST2, KEM1, RAR5, SEP1, SKI1, YGL173C, G1645

Chain

chain:1-1528

Reference Genes

BioGPS Gene:852702 XRN1

KEGG:sce:YGL173C XRN1

Monarch:852702 XRN1

NCBI Gene:852702 XRN1

UCSC:P22147 XRN1

Reference Transcript

RefSeq:NM_001181038.1 XRN1

Other Identifiers

852702

GO:0000184

GO:0000741

GO:0000932

GO:0000956

GO:0003674

GO:0003676

GO:0003682

GO:0003723

GO:0003729

GO:0004518

GO:0004527

GO:0004534

GO:0005515

GO:0005634

GO:0005737

GO:0005829

GO:0005874

GO:0006364

GO:0006401

GO:0006413

GO:0006970

GO:0006995

GO:0006997

GO:0007089

GO:0008150

GO:0008409

GO:0010494

GO:0016020

GO:0016075

GO:0016078

GO:0016242

GO:0016787

GO:0031370

GO:0032204

GO:0032968

GO:0033043

GO:0042594

GO:0043144

GO:0048284

GO:0048471

GO:0051052

GO:0051726

GO:0060261

GO:0061157

GO:0070479

GO:0070651

GO:0070966

GO:0071470

GO:0090512

GO:0110155

Participates

as an input of

as a component of

Other forms of this molecule

XRN1_YEAST [cytosol]

Inferred From

XRN1 [cytosol] (Homo sapiens)

Cross References

RefSeq

NP_011342.1

ENSEMBL

YGL173C, YGL173C, YGL173C_mRNA

PRO

P22147

PDB

6Q8Y

Interactors (34)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:P38203	2	LSM2 [cytosol] (R-SCE-429849) LSM2 [nucleoplasm] (R-SCE-71894)	0.809	10
UniProt:P53235 EIF2A			0.771	7
UniProt:P47017	1	LSM1 [cytosol] (R-SCE-429976)	0.758	4
UniProt:P57743	2	LSM3 [cytosol] (R-SCE-429894) LSM3 [nucleoplasm] (R-SCE-6806807)	0.758	12
UniProt:P40089	2	LSM5 [cytosol] (R-SCE-429839) LSM5 [nucleoplasm] (R-SCE-6806795)	0.758	14
UniProt:Q06406	2	LSM6 [cytosol] (R-SCE-429936) LSM6 [nucleoplasm] (R-SCE-6806794)	0.758	10
UniProt:P40070	2	LSM4 [cytosol] (R-SCE-429956) LSM4 [nucleoplasm] (R-SCE-6806804)	0.752	7
UniProt:P53550	1	DCP2 [cytosol] (R-SCE-429937)	0.738	4
UniProt:P10080 SSBP1			0.669	9
UniProt:P25644	1	PAT1 [cytosol] (R-SCE-2028617)	0.669	6
UniProt:P53883	2	phospho-NOP13 [cytosol] (R-SCE-165773-2) NOP13 [cytosol] (R-SCE-72589-2)	0.669	5
UniProt:P53905	2	LSM7 [cytosol] (R-SCE-2028610) LSM7 [nucleoplasm] (R-SCE-6806802)	0.669	5
UniProt:P35207 SKI2	1	SKI2 [cytosol] (R-SCE-391294)	0.669	4
UniProt:P07260	1	CDC33 [cytosol] (R-SCE-72578)	0.611	3
UniProt:P33322	1	CBF5 [nucleoplasm] (R-SCE-163102)	0.611	5
UniProt:Q12517	2	DCP1 [cytosol] (R-SCE-430043) DCP1 [cytosol] (R-SCE-429834)	0.592	3
UniProt:P47093	1	LSM8 [nucleoplasm] (R-SCE-6806779)	0.573	2
UniProt:P34230	2	PXA2 [cytosol] (R-SCE-382587) PXA2 [peroxisomal membrane] (R-SCE-382566)	0.573	3
UniProt:Q12159 YRA1			0.564	7
UniProt:Q12230 LSP1			0.564	12
UniProt:P36103 YKC3			0.564	7
UniProt:P07703 RPC40	2	RPC40 [nucleoplasm] (R-SCE-63498) RPC5_YEAST [nucleoplasm] (R-SCE-111824)	0.564	3
UniProt:P23293	1	SGV1 [nucleoplasm] (R-SCE-51801)	0.534	2
UniProt:P53131 PRP43			0.527	2
UniProt:P51998 RL4P			0.527	2
UniProt:Q12339 UTP23	1	UTP23 [nucleoplasm] (R-SCE-6790642)	0.527	2
UniProt:P39517	1	DHH1 [cytosol] (R-SCE-430032)	0.527	3
UniProt:P39935	2	phospho-TIF4631 [cytosol] (R-SCE-165762) TIF4631 [cytosol] (R-SCE-72584)	0.527	3
UniProt:P31334 RM09			0.527	2
UniProt:P11484	20	SSB1 [cytosol] (R-SCE-264476-4) SSB1 [cytosol] (R-SCE-3371410-4) SSB1 [cytosol] (R-SCE-3371408-4) SSB1 [nucleoplasm] (R-SCE-5082380-4) SSB1 [secretory granule lumen] (R-SCE-6801472-4) SSB1 [secretory granule lumen] (R-SCE-6801530-4) SSB1 [extracellular region] (R-SCE-6805936-4) SSB1 [extracellular region] (R-SCE-6806500-4) SSB1 [ficolin-1-rich granule lumen] (R-SCE-6801512-4) SSB1 [ficolin-1-rich granule lumen] (R-SCE-6801494-4) SSB1 [nucleoplasm] (R-SCE-912480-4) SSB1 [nucleoplasm] (R-SCE-5082367-4) SSB1 [nucleoplasm] (R-SCE-5252082-4) SSB1 [nucleoplasm] (R-SCE-5252088-4) SSB1 [nucleoplasm] (R-SCE-5252009-4) SSB1 [nucleoplasm] (R-SCE-5252047-4) SSB1 [cytosol] (R-SCE-5251948-4) SSB1 [cytosol] (R-SCE-5251981-4) SSB1 [cytosol] (R-SCE-3371521-4) SSB1 [cytosol] (R-SCE-5251954-4)	0.527	2
UniProt:P10592	20	SSA2 [cytosol] (R-SCE-264476-3) SSA2 [nucleoplasm] (R-SCE-6792605) SSA2 [cytosol] (R-SCE-3371410-3) SSA2 [cytosol] (R-SCE-3371408-3) SSA2 [cytosol] (R-SCE-6792602) SSA2 [nucleoplasm] (R-SCE-5082380-3) SSA2 [secretory granule lumen] (R-SCE-6801472-3) SSA2 [secretory granule lumen] (R-SCE-6801530-3) SSA2 [extracellular region] (R-SCE-6805936-3) SSA2 [extracellular region] (R-SCE-6806500-3) SSA2 [ficolin-1-rich granule lumen] (R-SCE-6801496) SSA2 [ficolin-1-rich granule lumen] (R-SCE-6801512-3) SSA2 [ficolin-1-rich granule lumen] (R-SCE-6801494-3) SSA2 [extracellular region] (R-SCE-6805872) SSA2 [nucleoplasm] (R-SCE-912480-3) SSA2 [nucleoplasm] (R-SCE-5082367-3) SSA2 [nucleoplasm] (R-SCE-5252082-3) SSA2 [nucleoplasm] (R-SCE-5252088-3) SSA2 [nucleoplasm] (R-SCE-5252009-3) SSA2 [nucleoplasm] (R-SCE-5252047-3)	0.527	2
UniProt:P10591	20	SSA1 [cytosol] (R-SCE-264476-2) SSA1 [cytosol] (R-SCE-3371410-2) SSA1 [cytosol] (R-SCE-3371408-2) SSA1 [nucleoplasm] (R-SCE-5082380-2) SSA1 [secretory granule lumen] (R-SCE-6801472-2) SSA1 [secretory granule lumen] (R-SCE-6801530-2) SSA1 [extracellular region] (R-SCE-6805936-2) SSA1 [extracellular region] (R-SCE-6806500-2) SSA1 [ficolin-1-rich granule lumen] (R-SCE-6801512-2) SSA1 [ficolin-1-rich granule lumen] (R-SCE-6801494-2) SSA1 [nucleoplasm] (R-SCE-912480-2) SSA1 [nucleoplasm] (R-SCE-5082367-2) SSA1 [nucleoplasm] (R-SCE-5252082-2) SSA1 [nucleoplasm] (R-SCE-5252088-2) SSA1 [nucleoplasm] (R-SCE-5252009-2) SSA1 [nucleoplasm] (R-SCE-5252047-2) SSA1 [cytosol] (R-SCE-5251948-2) SSA1 [cytosol] (R-SCE-5251981-2) SSA1 [cytosol] (R-SCE-3371521-2) SSA1 [cytosol] (R-SCE-5251954-2)	0.527	2
UniProt:P36520 RM10			0.527	2
UniProt:P30771	2	phospho-NAM7 [cytosol] (R-SCE-927856) NAM7 [cytosol] (R-SCE-927734)	0.527	2

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