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CDK9 [nucleoplasm]
Stable Identifier
R-HSA-51801
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Cdk 9 protein, Cell division protein kinase 9, Serine/threonine-protein kinase PITALRE, C-2K, Cell division protein kinase 9
Locations in the PathwayBrowser
Expand all
Disease (Homo sapiens)
Infectious disease (Homo sapiens)
Viral Infection Pathways (Homo sapiens)
HIV Infection (Homo sapiens)
HIV Life Cycle (Homo sapiens)
Late Phase of HIV Life Cycle (Homo sapiens)
Transcription of the HIV genome (Homo sapiens)
Formation of HIV elongation complex in the absence of HIV Tat (Homo sapiens)
Hyperphosphorylation (Ser2) of RNA Pol II CTD by P-TEFb complex (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV-1 early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Recruitment of elongation factors to form HIV-1 elongation complex (Homo sapiens)
HIV-1 early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV-1 elongation complex [nucleoplasm] (Homo sapiens)
HIV-1 early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV Transcription Elongation (Homo sapiens)
Tat-mediated elongation of the HIV-1 transcript (Homo sapiens)
Addition of nucleotides leads to HIV-1 transcript elongation (Homo sapiens)
HIV-1 Tat-containing processive elongation complex [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV-1 elongation complex containing Tat [nucleoplasm] (Homo sapiens)
Tat-containing early elongation complex with hyperphosphorylated Pol II CTD ( phospho-NELF phospho DSIF) [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Formation of HIV-1 elongation complex containing HIV-1 Tat (Homo sapiens)
Association of Tat with P-TEFb(Cyclin T1:Cdk9) (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Hyperphosphorylation (Ser2) of RNA Pol II CTD by the P-TEFb(Cyclin T1:Cdk9) complex (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Tat-containing early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Phosphorylation of NEFL by the P-TEFb(Cyclin T1:Cdk9) complex (Homo sapiens)
Tat-containing early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Tat-containing early elongation complex with hyperphosphorylated Pol II CTD and phospho-NELF [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Phosphorylation of DSIF by the P-TEFb(Cyclin T1:Cdk9) complex (Homo sapiens)
Tat-containing early elongation complex with hyperphosphorylated Pol II CTD ( phospho-NELF phospho DSIF) [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Tat-containing early elongation complex with hyperphosphorylated Pol II CTD and phospho-NELF [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Recruitment of elongation factors to form HIV-1 elongation complex (Homo sapiens)
HIV-1 elongation complex containing Tat [nucleoplasm] (Homo sapiens)
Tat-containing early elongation complex with hyperphosphorylated Pol II CTD ( phospho-NELF phospho DSIF) [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Tat-containing early elongation complex with hyperphosphorylated Pol II CTD ( phospho-NELF phospho DSIF) [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Pol II elongation complex moves on the HIV-1 template as transcript elongates (Homo sapiens)
HIV-1 Tat-containing processive elongation complex [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Tat-containing elongation complex prior to separation [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Separation of elongating HIV-1 transcript from template (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9)-containing elongation complex with separated and uncleaved transcript [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Tat-containing elongation complex prior to separation [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV elongation arrest and recovery (Homo sapiens)
7-14 nt. Backtracking of Pol II complex on the HIV-1 template leading to elongation arrest (Homo sapiens)
HIV-1 arrested processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV-1 processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Abortive termination of HIV-1 elongation after arrest (Homo sapiens)
HIV-1 aborted elongation complex after arrest [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV-1 arrested processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
TFIIS-mediated recovery of HIV-1 elongation from arrest (Homo sapiens)
HIV-1 arrested processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV-1 processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Pausing and recovery of HIV elongation (Homo sapiens)
2-4 nt.backtracking of Pol II complex on the HIV-1 template leading to elongation pausing (Homo sapiens)
HIV-1 paused processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV-1 processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Resumption of elongation of HIV-1 transcript after recovery from pausing (Homo sapiens)
HIV-1 paused processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV-1 processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Pausing and recovery of Tat-mediated HIV elongation (Homo sapiens)
2-4 nt.backtracking of Pol II complex on the HIV-1 template leading to elongation pausing (Homo sapiens)
HIV-1 Tat-containing paused processive elongation complex [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV-1 Tat-containing processive elongation complex [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Resumption of elongation of HIV-1 transcript after recovery from pausing (Homo sapiens)
HIV-1 Tat-containing paused processive elongation complex [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV-1 Tat-containing processive elongation complex [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Tat-mediated HIV elongation arrest and recovery (Homo sapiens)
7-14 nt. Backtracking of Pol II complex on the HIV-1 template leading to elongation arrest (Homo sapiens)
HIV-1 Tat-containing arrested processive elongation complex [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV-1 Tat-containing processive elongation complex [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Abortive termination of HIV-1 elongation after arrest (Tat-containing elongation complex) (Homo sapiens)
HIV-1 Tat-containing aborted elongation complex after arrest [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV-1 Tat-containing arrested processive elongation complex [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
TFIIS-mediated recovery of elongation from arrest (Homo sapiens)
HIV-1 Tat-containing arrested processive elongation complex [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
HIV-1 Tat-containing processive elongation complex [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Host Interactions of HIV factors (Homo sapiens)
Interactions of Tat with host cellular proteins (Homo sapiens)
Association of Tat with P-TEFb(Cyclin T1:Cdk9) (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Tat:P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Formation of the P-TEFb(Cyclin T1:Cdk9) complex (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Gene expression (Transcription) (Homo sapiens)
RNA Polymerase II Transcription (Homo sapiens)
Generic Transcription Pathway (Homo sapiens)
Transcriptional Regulation by TP53 (Homo sapiens)
TP53 Regulates Transcription of DNA Repair Genes (Homo sapiens)
CCNK:CDK12 binds RNA Pol II at DNA repair genes (Homo sapiens)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Homo sapiens)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Homo sapiens)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Homo sapiens)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Homo sapiens)
CCNK:CDK12:CDK12-Phosphorylated Elongation Complex at DNA repair genes [nucleoplasm] (Homo sapiens)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Homo sapiens)
CDK12-phosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Homo sapiens)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Homo sapiens)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
CDK12 stimulates expression of DNA repair genes (Homo sapiens)
CCNK:CDK12:CDK12-Phosphorylated Elongation Complex at DNA repair genes [nucleoplasm] (Homo sapiens)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Homo sapiens)
CDK12-phosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer (Homo sapiens)
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription (Homo sapiens)
Phosphorylation of SMAD2 and SMAD3 linker regions by CDK8 or CDK9 (Homo sapiens)
CDK8:CCNC/ CDK9:CCNT [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RNA Polymerase II Pre-transcription Events (Homo sapiens)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Homo sapiens)
Paused processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Homo sapiens)
Arrested processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Abortive termination of elongation after arrest (Homo sapiens)
Aborted elongation complex after arrest [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Arrested processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Elongating transcript encounters a lesion in the template (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Formation of P-TEFb complex (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Resumption of elongation after recovery from pausing (Homo sapiens)
Paused processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
TFIIS-mediated recovery of elongation from arrest (Homo sapiens)
Arrested processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RNA Polymerase II Transcription Elongation (Homo sapiens)
Addition of nucleotides leads to transcript elongation (Homo sapiens)
Elongation complex [nucleoplasm] (Homo sapiens)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Formation of RNA Pol II elongation complex (Homo sapiens)
Hyperphosphorylation (Ser2) of RNA Pol II CTD by P-TEFb complex (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Recruitment of elongation factors to form elongation complex (Homo sapiens)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Elongation complex [nucleoplasm] (Homo sapiens)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Pol II elongation complex moves on the template as transcript elongates (Homo sapiens)
Elongation complex prior to separation [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Processive elongation complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Separation of elongating transcript from template (Homo sapiens)
Elongation complex prior to separation [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RNA polymerase II transcribes snRNA genes (Homo sapiens)
CBCAP complex binds 7-methylguanosine cap of snRNA (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter (Homo sapiens)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Dephosphorylation and dissociation of RNA polymerase II at 3' end of snRNA gene (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
General transcription factors bind SNAPc:POU2F1:ZNF143:snRNA gene (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Integrator complex processes the 3' end of snRNA (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Pre-snRNA is elongated and capped with 7-methylguanosine (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Pre-snRNA transcript initiation, Integrator binding, LEC binding (Homo sapiens)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RNA polymerase II binds initiation factors at promoter of snRNA gene (U1, U2, U4, U4atac, U5, U11, U12) (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Homo sapiens)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RPAP2 binds RNA polymerase II phosphorylated at serine-7 residues of heptad repeats in the C-terminal domain (Homo sapiens)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Homo sapiens)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Signal Transduction (Homo sapiens)
Signaling by Nuclear Receptors (Homo sapiens)
ESR-mediated signaling (Homo sapiens)
Estrogen-dependent gene expression (Homo sapiens)
ESR1:ESTG:P-TEFb recruited to paused RNA polymerase II on MYB gene (Homo sapiens)
ESR1:ESTG:P-TEFb [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
MYB gene:hypophosphorylated RNA polymerase II:TFIIF:ESR1:ESTG:P-TEFb [nucleoplasm] (Homo sapiens)
ESR1:ESTG:P-TEFb [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Estrogen-responsive MYB gene expression (Homo sapiens)
ESR1:ESTG:P-TEFb [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
MYB gene:hyperphosphorylated RNA polymerase II:TFIIF:ESR1:ESTG:P-TEFb [nucleoplasm] (Homo sapiens)
ESR1:ESTG:P-TEFb [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
p-TEFb phosphorylates serine 2 in RNA polymerase II CTD (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
MYB gene:hyperphosphorylated RNA polymerase II:TFIIF:ESR1:ESTG:P-TEFb [nucleoplasm] (Homo sapiens)
ESR1:ESTG:P-TEFb [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
MYB gene:hypophosphorylated RNA polymerase II:TFIIF:ESR1:ESTG:P-TEFb [nucleoplasm] (Homo sapiens)
ESR1:ESTG:P-TEFb [nucleoplasm] (Homo sapiens)
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
Signaling by TGFB family members (Homo sapiens)
Signaling by TGF-beta Receptor Complex (Homo sapiens)
Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer (Homo sapiens)
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription (Homo sapiens)
Phosphorylation of SMAD2 and SMAD3 linker regions by CDK8 or CDK9 (Homo sapiens)
CDK8:CCNC/ CDK9:CCNT [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
CDK9 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:P50750 CDK9
Gene Names
CDK9, CDC2L4, TAK
Chain
chain:1-372
Reference Genes
BioGPS Gene:1025 CDK9
COSMIC (genes):CDK9 CDK9
CTD Gene:1025 CDK9
dbSNP Gene:1025 CDK9
ENSEMBL:ENSG00000136807 CDK9
HGNC:1780 CDK9
KEGG:hsa:1025 CDK9
Monarch:1025 CDK9
NCBI Gene:1025 CDK9
OMIM:603251 CDK9
UCSC:P50750 CDK9
Reference Transcript
RefSeq:NM_001261.3 CDK9
Other Identifiers
1025
11720659_at
11720660_s_at
11720661_at
17089446
17119724
203198_PM_at
203198_at
236023_PM_at
236023_at
3190037
3190038
3190039
3190040
3190041
3190042
3190044
3190045
3190046
3190047
3190048
3190049
3190050
3190051
3190052
3190053
3190054
3190055
3190056
3190057
3190058
387_at
62680_at
8158112
A_14_P113061
A_23_P158083
A_23_P169470
A_32_P309929
GE79527
GO:0000976
GO:0000978
GO:0001223
GO:0003677
GO:0003682
GO:0003711
GO:0003723
GO:0003824
GO:0004672
GO:0004674
GO:0004693
GO:0005515
GO:0005524
GO:0005634
GO:0005654
GO:0005737
GO:0006281
GO:0006282
GO:0006325
GO:0006351
GO:0006355
GO:0006366
GO:0006367
GO:0006368
GO:0006468
GO:0008023
GO:0008024
GO:0008283
GO:0008353
GO:0016020
GO:0016301
GO:0016605
GO:0016740
GO:0017069
GO:0019901
GO:0031297
GO:0031440
GO:0032968
GO:0036464
GO:0043226
GO:0043923
GO:0045944
GO:0051147
GO:0051647
GO:0051726
GO:0070691
GO:0071345
GO:0097322
GO:0106310
GO:0120186
GO:0120187
GO:0140096
GO:0140110
GO:0140673
HMNXSV003003121
HMNXSV003008191
HMNXSV003051590
Hs.182907.0.A1_3p_at
ILMN_1747556
PH_hs_0009057
TC09000671.hg
X80230_at
g4502746_3p_at
Participates
as an input of
Formation of P-TEFb complex (Homo sapiens)
Formation of the P-TEFb(Cyclin T1:Cdk9) complex (Homo sapiens)
as a component of
P-TEFb(Cyclin T1:Cdk9) complex [nucleoplasm] (Homo sapiens)
P-TEFb complex [nucleoplasm] (Homo sapiens)
Inferred To
CDK9 [nucleoplasm]
(Bos taurus)
CDK9 [nucleoplasm]
(Caenorhabditis elegans)
CDK9 [nucleoplasm]
(Canis familiaris)
CDK9 [nucleoplasm]
(Danio rerio)
CDK9 [nucleoplasm]
(Dictyostelium discoideum)
CDK9 [nucleoplasm]
(Drosophila melanogaster)
CDK9 [nucleoplasm]
(Gallus gallus)
CDK9 [nucleoplasm]
(Mus musculus)
CDK9 [nucleoplasm]
(Plasmodium falciparum)
CDK9 [nucleoplasm]
(Rattus norvegicus)
CDK9 [nucleoplasm]
(Saccharomyces cerevisiae)
CDK9 [nucleoplasm]
(Schizosaccharomyces pombe)
CDK9 [nucleoplasm]
(Sus scrofa)
CDK9 [nucleoplasm]
(Xenopus tropicalis)
Cross References
RefSeq
NP_001252.1
Guide to Pharmacology - Targets
1981
OpenTargets
ENSG00000136807
ENSEMBL
ENSP00000362361
,
ENST00000373264
,
ENSG00000136807
ZINC - FDA approved
CDK9_HUMAN
ZINC - Substances
CDK9_HUMAN
ZINC - Biogenic
CDK9_HUMAN
ZINC target
P50750
PRO
P50750
GlyGen
P50750
PDB
6W9E
,
7NWK
,
3MI9
,
6GZH
,
3TNI
,
4BCI
,
4BCJ
,
3BLR
,
3LQ5
,
8I0L
,
4BCH
,
3TNH
,
3BLQ
,
4BCF
,
4EC8
,
3BLH
,
3MY1
,
4EC9
,
4BCG
,
3TN8
,
3MIA
,
6Z45
,
6CYT
,
4OGR
,
4OR5
,
5L1Z
,
4IMY
,
8K5R
ZINC - Investigational
CDK9_HUMAN
IntEnz
2.7.11.22
HPA
ENSG00000136807-CDK9
GeneCards
CDK9
Pharos - Targets
P50750
ZINC - Predictions - Purchasable
CDK9_HUMAN
HMDB Protein
HMDBP01360
Interactors (32)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:O60563 CCNT1
1
CCNT1 [nucleoplasm]
(R-HSA-51611)
0.977
31
UniProt:Q4G0J3 LARP7
0.929
18
UniProt:O94992 HEXI1
0.929
17
UniProt:Q13451 FKBP5
2
FKBP5 [nucleoplasm]
(R-HSA-8939165)
FKBP5 [cytosol]
(R-HSA-5618096)
0.899
10
UniProt:O60583 CCNT2
1
CCNT2 [nucleoplasm]
(R-HSA-51613)
0.899
10
UniProt:Q16543 CDC37
1
CDC37 [cytosol]
(R-HSA-1221609)
0.886
9
UniProt:P51825 AFF1
0.87
15
UniProt:Q9UHB7 AFF4
1
AFF4 [nucleoplasm]
(R-HSA-8932788)
0.87
12
UniProt:Q7L2J0 MEPCE
0.837
8
UniProt:Q03111 MLLT1
1
MLLT1 [nucleoplasm]
(R-HSA-8932918)
0.788
7
UniProt:P07900 HSP90AA1
8
HSP90AA1 [lysosomal lumen]
(R-HSA-9622850)
HSP90AA1 [cytosol]
(R-HSA-192864)
HSP90AA1 [nucleoplasm]
(R-HSA-5082401)
HSP90AA1 [plasma membrane]
(R-HSA-534996)
HSP90AA1 [ficolin-1-rich granule lumen]
(R-HSA-6801470)
HSP90AA1 [extracellular region]
(R-HSA-3221946)
HSP90AA1 [secretory granule lumen]
(R-HSA-6801515)
HSP90AA1 [endocytic vesicle lumen]
(R-HSA-3221912)
0.744
6
UniProt:P08238 HSP90AB1
6
HSP90AB1 [lysosomal lumen]
(R-HSA-9622846)
HSP90AB1 [nucleoplasm]
(R-HSA-5082399)
HSP90AB1 [cytosol]
(R-HSA-419617)
HSP90AB1 [ficolin-1-rich granule lumen]
(R-HSA-6801491)
HSP90AB1 [extracellular region]
(R-HSA-6806463)
HSP90AB1 [secretory granule lumen]
(R-HSA-6801477)
0.744
6
UniProt:P04608 tat
1
Tat (P04608) [nucleoplasm]
(R-HIV-175856)
0.737
8
UniProt:P42568 MLLT3
1
MLLT3 [nucleoplasm]
(R-HSA-8932789)
0.725
6
UniProt:P51826 AFF3
0.725
5
UniProt:Q96MH2 HEXI2
0.725
6
UniProt:O60885-1 BRD4
0.656
9
UniProt:O00170 AIP
2
AIP [nucleoplasm]
(R-HSA-8937156)
AIP [cytosol]
(R-HSA-8936839)
0.643
5
UniProt:Q9NYV4 CDK12
1
CDK12 [nucleoplasm]
(R-HSA-6797012)
0.643
3
UniProt:Q9NR30 DDX21
1
DDX21 [nucleoplasm]
(R-HSA-5250652)
0.564
2
UniProt:Q9HAW4 CLSPN
5
PolyUb-CLSPN [nucleoplasm]
(R-HSA-6783087)
CLSPN(1-1072) [nucleoplasm]
(R-HSA-351929)
CLSPN(1073-1332) [nucleoplasm]
(R-HSA-351935)
CLSPN [nucleoplasm]
(R-HSA-176282)
p-T916,S945-CLSPN [nucleoplasm]
(R-HSA-176296)
0.558
3
UniProt:Q8WXE1 ATRIP
1
ATRIP [nucleoplasm]
(R-HSA-176231)
0.558
3
UniProt:Q13535 ATR
1
ATR [nucleoplasm]
(R-HSA-912443)
0.558
3
UniProt:Q6NYC1 JMJD6
1
JMJD6 [nucleoplasm]
(R-HSA-4754226)
0.544
5
UniProt:P53041 PPP5C
2
PPP5C [nucleoplasm]
(R-HSA-5683410)
PPP5C [cytosol]
(R-HSA-5675402)
0.539
3
UniProt:P49336 CDK8
1
CDK8 [nucleoplasm]
(R-HSA-212440)
0.527
4
UniProt:Q6PD62 CTR9
1
CTR9 [nucleoplasm]
(R-HSA-8866694)
0.527
2
UniProt:O60583-2 CCNT2
0.499
2
UniProt:O60583-1 CCNT2
0.499
3
UniProt:Q9Y5B9 SUPT16H
1
SUPT16H [nucleoplasm]
(R-HSA-112415)
0.462
3
UniProt:P17542 TAL1
1
TAL1 [nucleoplasm]
(R-HSA-8956511)
0.462
3
UniProt:Q9UPN9 TRIM33
1
TRIM33 [nucleoplasm]
(R-HSA-870522)
0.462
3
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