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SETDB1 [nucleoplasm]
Stable Identifier
R-HSA-417136
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
nucleoplasm
Synonyms
Histone-lysine N-methyltransferase SETDB1, SETB1_HUMAN, ESET, KMT1E
Locations in the PathwayBrowser
Expand all
Chromatin organization (Homo sapiens)
Chromatin modifying enzymes (Homo sapiens)
PKMTs methylate histone lysines (Homo sapiens)
ATF7IP binds SETDB1 (Homo sapiens)
ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
SUV39H1 (KMT1A), SUV39H2 (KTM1B), SETDB1 (KMT1E), SETDB2 (KMT1F) methylate dimethyl-lysine-10 of histone H3 (H3K9) (Homo sapiens)
ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
Gene expression (Transcription) (Homo sapiens)
Epigenetic regulation of gene expression (Homo sapiens)
Regulation of endogenous retroelements (Homo sapiens)
Regulation of endogenous retroelements by KRAB-ZFP proteins (Homo sapiens)
ATF7IP:SETDB1 binds SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin (Homo sapiens)
ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin [nucleoplasm] (Homo sapiens)
ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 in ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement trimethylates lysine-9 of histone H3 in nucleosomes (Homo sapiens)
ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin [nucleoplasm] (Homo sapiens)
ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin with H3K9me3 [nucleoplasm] (Homo sapiens)
ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
Regulation of endogenous retroelements by the Human Silencing Hub (HUSH) complex (Homo sapiens)
SETDB1 in me3-K16-ATF7IP:SETDB1:MORC2:HUSH complex:L1 RNA trimethylates lysine-9 of histone H3 (H3K9me3) (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
me3-K16-ATF7IP:SETDB1:MORC2:HUSH complex:L1 RNA [nucleoplasm] (Homo sapiens)
me3-K16-ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 in me3-K16-ATF7IP:SETDB1:MORC2:HUSH complex:L1HS,L1PA2,3 heterochromatin trimethylates lysine-9 of histone H3 in adjacent nucleosome (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
me3-K16-ATF7IP:SETDB1:MORC2:HUSH complex:L1HS,L1PA2,3:Nucleosome with H3K9me3 [nucleoplasm] (Homo sapiens)
me3-K16-ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
me3-K16-ATF7IP:SETDB1 and MORC2 bind MPHOSPH8 (MPP8) in HUSH complex:L1 RNA (Homo sapiens)
me3-K16-ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
me3-K16-ATF7IP:SETDB1:MORC2:HUSH complex:L1 RNA [nucleoplasm] (Homo sapiens)
me3-K16-ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
me3-K16-ATF7IP:SETDB1 and MORC2 bind MPHOSPH8 (MPP8) in HUSH complex:L1HS,L1PA2,3 heterochromatin (Homo sapiens)
me3-K16-ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
me3-K16-ATF7IP:SETDB1:MORC2:HUSH complex:L1HS,L1PA2,3:Nucleosome with H3K9me3 [nucleoplasm] (Homo sapiens)
me3-K16-ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
SETDB1 [nucleoplasm] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q15047 SETDB1
Gene Names
SETDB1, ESET, KIAA0067, KMT1E
Chain
chain:1-1291
Reference Genes
BioGPS Gene:9869 SETDB1
COSMIC (genes):SETDB1 SETDB1
CTD Gene:9869 SETDB1
dbSNP Gene:9869 SETDB1
ENSEMBL:ENSG00000143379 SETDB1
ENSEMBL_homo_sapiens_GENE:ENSG00000143379.13 SETDB1
HGNC:10761 SETDB1
KEGG Gene (Homo sapiens):9869 SETDB1
Monarch:9869 SETDB1
NCBI Gene:9869 SETDB1
OMIM:604396 SETDB1
UCSC:Q15047 SETDB1
Reference Transcript
RefSeq:NM_012432.3 SETDB1
RefSeq:XM_017002955.1 SETDB1
RefSeq:NM_001243491.1 SETDB1
RefSeq:NM_001145415.1 SETDB1
Other Identifiers
11719687_at
11757711_a_at
16670632
203155_PM_at
203155_at
214197_PM_s_at
214197_s_at
2358521
2358522
2358523
2358527
2358528
2358530
2358531
2358533
2358534
2358537
2358541
2358542
2358543
2358544
2358545
2358546
2358548
2358549
2358552
2358553
2358554
2358555
2358557
2358559
2358560
2358562
2358563
2358565
2358567
2358568
2358569
34189_at
7905258
9869
A_14_P100717
A_23_P126393
A_23_P126398
A_33_P3252479
A_33_P3305399
D31891_at
GE57172
GO:0003677
GO:0003682
GO:0003824
GO:0005515
GO:0005634
GO:0005654
GO:0005694
GO:0005737
GO:0006325
GO:0008168
GO:0008270
GO:0010629
GO:0016279
GO:0016740
GO:0032259
GO:0034968
GO:0036211
GO:0042054
GO:0043226
GO:0043231
GO:0045869
GO:0046872
GO:0046974
GO:0070828
GO:0090309
GO:0140096
GO:0140938
GO:0140947
GO:0140948
GO:0140949
GO:1990841
HMNXSV003010699
HMNXSV003056740
HMNXSV003057471
Hs.20991.1.S1_3p_a_at
Hs.20991.1.S1_3p_at
ILMN_1718207
PH_hs_0023897
TC01001194.hg
TC01004737.hg
g6912651_3p_at
Participates
as a component of
me3-K16-ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
ATF7IP:SETDB1 [nucleoplasm] (Homo sapiens)
as an input of
ATF7IP binds SETDB1 (Homo sapiens)
Inferred To
SETDB1 [nucleoplasm]
(Bos taurus)
SETDB1 [nucleoplasm]
(Canis familiaris)
SETDB1 [nucleoplasm]
(Danio rerio)
SETDB1 [nucleoplasm]
(Drosophila melanogaster)
SETDB1 [nucleoplasm]
(Gallus gallus)
SETDB1 [nucleoplasm]
(Mus musculus)
SETDB1 [nucleoplasm]
(Sus scrofa)
Setdb1 [nucleoplasm]
(Rattus norvegicus)
Cross References
RefSeq
XP_016858444.1
,
NP_001138887.1
,
NP_036564.3
,
NP_001230420.1
ZINC - World Drugs
SETB1_HUMAN
Guide to Pharmacology - Targets
2705
OpenTargets
ENSG00000143379
ZINC - Substances
SETB1_HUMAN
ZINC - Biogenic
SETB1_HUMAN
ZINC target
Q15047
PRO
Q15047
PDB
6BHH
,
5KH6
,
6AU3
,
6BHD
,
4X3S
,
5QT2
,
6BHI
,
5KCH
,
8IYA
,
7C9N
,
7CAJ
,
6BPI
,
8UWP
,
5KCO
,
8G5E
,
7CD9
,
6AU2
,
6BHG
,
7CJT
,
3DLM
,
5QT1
,
5KE3
,
6BHE
,
5KE2
ZINC - Metabolites
SETB1_HUMAN
IntEnz
2.1.1.366
HPA
ENSG00000143379-SETDB1
GeneCards
Q15047
Ensembl
ENSP00000271640
,
ENSG00000143379
,
ENST00000368969
,
ENSP00000357965
,
ENSP00000357958
,
ENST00000368962
,
ENST00000271640
Pharos - Targets
Q15047
ZINC - Predictions - Purchasable
SETB1_HUMAN
HMDB Protein
HMDBP00411
Interactors (15)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P31749 AKT1
14
p-T308,S473-AKT1 E17K [nucleoplasm]
(R-HSA-2399994)
p-T308,S473-AKT1 E17K [cytosol]
(R-HSA-2243935)
AKT1 E17K [cytosol]
(R-HSA-2219526)
p-S473-AKT1 E17K [plasma membrane]
(R-HSA-2243944)
AKT1 E17K [plasma membrane]
(R-HSA-1500573)
p-S473-AKT1 [cytosol]
(R-HSA-9841264)
p-T308,S473-AKT1 [plasma membrane]
(R-HSA-199430)
p-Y315,Y326-AKT1 [cytosol]
(R-HSA-8848757)
p-T308-AKT1 [cytosol]
(R-HSA-198634)
AKT1 [cytosol]
(R-HSA-58252)
AKT1 [plasma membrane]
(R-HSA-199416)
p-S473-AKT1 [plasma membrane]
(R-HSA-377265)
p-T308,S473-AKT1 [cytosol]
(R-HSA-198356)
p-T308,S473-AKT1 [nucleoplasm]
(R-HSA-198357)
0.639
9
UniProt:Q9Y6K1 DNMT3A
2
monoSUMO1-K-DNMT3A [nucleoplasm]
(R-HSA-4655415)
DNMT3A [nucleoplasm]
(R-HSA-212287)
0.61
7
UniProt:Q9UIS9 MBD1
2
monoSUMO1-K499,K538-MBD1 [nucleoplasm]
(R-HSA-4090331)
MBD1 [nucleoplasm]
(R-HSA-417134)
0.581
3
UniProt:Q99549 MPHOSPH8
1
MPHOSPH8 [nucleoplasm]
(R-HSA-9844052)
0.564
3
UniProt:P04183 TK1
1
TK1 [cytosol]
(R-HSA-73500)
0.553
2
UniProt:P63279 UBE2I
9
monoSUMO1-K14-UBE2I [nucleoplasm]
(R-HSA-4085358)
UBE2I [nuclear envelope]
(R-HSA-4655408)
SUMO2-C93-UBE2I [cytosol]
(R-HSA-4656944)
SUMO3-C93-UBE2I [nucleoplasm]
(R-HSA-3730629)
UBE2I [cytosol]
(R-HSA-4655342)
SUMO1-C93-UBE2I [cytosol]
(R-HSA-4656909)
SUMO2-C93-UBE2I [nucleoplasm]
(R-HSA-3730619)
SUMO1-C93-UBE2I [nucleoplasm]
(R-HSA-3730617)
UBE2I [nucleoplasm]
(R-HSA-912481)
0.553
2
UniProt:P11802 CDK4
3
CDK4 [cytosol]
(R-HSA-68330)
CDK4 [nucleoplasm]
(R-HSA-113843)
p-T172-CDK4 [nucleoplasm]
(R-HSA-113830)
0.553
2
UniProt:Q9H9J2 MRPL44
1
MRPL44 [mitochondrial inner membrane]
(R-HSA-5368245)
0.553
2
UniProt:Q15714 T22D1
0.553
2
UniProt:P61956 SUMO2
6
lysyl-G93-SUMO2 [cytosol]
(R-HSA-9834803)
SUMO2(1-95) [nucleoplasm]
(R-HSA-2990837)
UBA2-G93-SUMO2 [nucleoplasm]
(R-HSA-3730618)
SUMO2 [nucleoplasm]
(R-HSA-2984281)
UBE2I-G93-SUMO2 [nucleoplasm]
(R-HSA-3730625)
lysyl-G93-SUMOyl-K11-SUMO2 [nucleoplasm]
(R-HSA-9761546)
0.553
2
UniProt:P02766 TTR
2
TTR [azurophil granule lumen]
(R-HSA-6799366)
TTR [extracellular region]
(R-HSA-976883)
0.553
2
UniProt:Q96PV0 SYNGAP1
1
SYNGAP1 [cytosol]
(R-HSA-5658217)
0.527
5
UniProt:O43463 SUV39H1
1
SUV39H1 [nucleoplasm]
(R-HSA-427517)
0.527
2
UniProt:Q6P1J9 CDC73
1
CDC73 [nucleoplasm]
(R-HSA-3322360)
0.524
3
UniProt:Q9NWR8 MCUB
1
MCUB [mitochondrial inner membrane]
(R-HSA-8949153)
0.499
3
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